Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Timp3P39876 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Timp3P39876 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Gm13809-201ENSMUST00000117921 597 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Gm12164-201ENSMUST00000121695 551 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.55□□□□□ -0.88
Timp3P39876 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.55□□□□□ -0.88
Timp3P39876 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.55□□□□□ -0.88
Timp3P39876 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Gm5706-201ENSMUST00000181525 993 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Gm10774-201ENSMUST00000188689 204 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Gm9555-201ENSMUST00000200908 583 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.55□□□□□ -0.88
Timp3P39876 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Ginm1-202ENSMUST00000065124 300 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Timp3P39876 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Timp3P39876 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Timp3P39876 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.55□□□□□ -0.88
Timp3P39876 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Timp3P39876 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Timp3P39876 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Timp3P39876 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Timp3P39876 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.54□□□□□ -0.88
Timp3P39876 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Timp3P39876 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Timp3P39876 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.54□□□□□ -0.88
Timp3P39876 Gm13263-201ENSMUST00000121271 838 ntBASIC9.54□□□□□ -0.88
Timp3P39876 Gm8199-201ENSMUST00000121323 823 ntBASIC9.54□□□□□ -0.88
Timp3P39876 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.54□□□□□ -0.88
Timp3P39876 Gm8815-201ENSMUST00000173809 620 ntBASIC9.54□□□□□ -0.88
Timp3P39876 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Timp3P39876 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.54□□□□□ -0.88
Timp3P39876 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.54□□□□□ -0.88
Timp3P39876 Gm43916-201ENSMUST00000205062 967 ntBASIC9.54□□□□□ -0.88
Timp3P39876 Gm9797-202ENSMUST00000218003 294 ntBASIC9.54□□□□□ -0.88
Timp3P39876 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Timp3P39876 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms