Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VtnP29788 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VtnP29788 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VtnP29788 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VtnP29788 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
VtnP29788 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VtnP29788 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VtnP29788 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.52□□□□□ -0.73
VtnP29788 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.52□□□□□ -0.73
VtnP29788 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.52□□□□□ -0.73
VtnP29788 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.52□□□□□ -0.73
VtnP29788 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.52□□□□□ -0.73
VtnP29788 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.52□□□□□ -0.73
VtnP29788 Gm38314-201ENSMUST00000195709 625 ntBASIC10.52□□□□□ -0.73
VtnP29788 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.52□□□□□ -0.73
VtnP29788 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.52□□□□□ -0.73
VtnP29788 Gm45113-201ENSMUST00000207518 165 ntBASIC10.52□□□□□ -0.73
VtnP29788 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.52□□□□□ -0.73
VtnP29788 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.52□□□□□ -0.73
VtnP29788 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VtnP29788 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VtnP29788 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VtnP29788 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VtnP29788 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VtnP29788 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.51□□□□□ -0.73
VtnP29788 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VtnP29788 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VtnP29788 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
VtnP29788 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
VtnP29788 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VtnP29788 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.51□□□□□ -0.73
VtnP29788 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.51□□□□□ -0.73
VtnP29788 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.51□□□□□ -0.73
VtnP29788 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VtnP29788 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.51□□□□□ -0.73
VtnP29788 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.51□□□□□ -0.73
VtnP29788 Gm5982-201ENSMUST00000196234 512 ntBASIC10.51□□□□□ -0.73
VtnP29788 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
VtnP29788 Gm44545-201ENSMUST00000208262 746 ntBASIC10.51□□□□□ -0.73
VtnP29788 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
VtnP29788 Gm44551-201ENSMUST00000208804 171 ntBASIC10.51□□□□□ -0.73
VtnP29788 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.51□□□□□ -0.73
VtnP29788 Gm6867-201ENSMUST00000219165 425 ntBASIC10.51□□□□□ -0.73
VtnP29788 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.51□□□□□ -0.73
VtnP29788 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VtnP29788 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms