Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.21□□□□□ -0.77
Ccl3P10855 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ccl3P10855 Gm11578-201ENSMUST00000118530 459 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Gm24992-201ENSMUST00000157412 130 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Gm17214-201ENSMUST00000164501 541 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Gm24809-201ENSMUST00000175318 271 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Gm44323-201ENSMUST00000198689 129 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Gm44216-201ENSMUST00000203942 157 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.21□□□□□ -0.77
Ccl3P10855 Gm19640-201ENSMUST00000214849 464 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.21□□□□□ -0.77
Ccl3P10855 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
Ccl3P10855 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccl3P10855 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.21□□□□□ -0.78
Ccl3P10855 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Ccl3P10855 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Ccl3P10855 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.21□□□□□ -0.78
Ccl3P10855 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Ccl3P10855 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.21□□□□□ -0.78
Ccl3P10855 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Ccl3P10855 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Ccl3P10855 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl3P10855 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm14274-201ENSMUST00000117182 615 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Gm7541-201ENSMUST00000118361 535 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Gm8302-201ENSMUST00000119217 852 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Gm12948-201ENSMUST00000119406 682 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm17070-201ENSMUST00000170463 784 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.2□□□□□ -0.78
Ccl3P10855 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Gm5870-201ENSMUST00000196461 282 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.2□□□□□ -0.78
Ccl3P10855 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ccl3P10855 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ccl3P10855 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ccl3P10855 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.2□□□□□ -0.78
Ccl3P10855 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ccl3P10855 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Ccl3P10855 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ccl3P10855 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.2□□□□□ -0.78
Ccl3P10855 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl3P10855 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms