Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.28□□□□□ -0.44
TnfP06804 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.28□□□□□ -0.44
TnfP06804 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TnfP06804 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
TnfP06804 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.27□□□□□ -0.44
TnfP06804 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TnfP06804 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TnfP06804 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.27□□□□□ -0.45
TnfP06804 Mir1901-201ENSMUST00000122616 78 ntBASIC12.27□□□□□ -0.45
TnfP06804 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.27□□□□□ -0.45
TnfP06804 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TnfP06804 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.27□□□□□ -0.45
TnfP06804 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.27□□□□□ -0.45
TnfP06804 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.27□□□□□ -0.45
TnfP06804 Gm6722-201ENSMUST00000221586 390 ntBASIC12.27□□□□□ -0.45
TnfP06804 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.27□□□□□ -0.45
TnfP06804 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.27□□□□□ -0.45
TnfP06804 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TnfP06804 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TnfP06804 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TnfP06804 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Gm13937-201ENSMUST00000121000 988 ntBASIC12.26□□□□□ -0.45
TnfP06804 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.26□□□□□ -0.45
TnfP06804 Mir6998-201ENSMUST00000183343 64 ntBASIC12.26□□□□□ -0.45
TnfP06804 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Gm44158-201ENSMUST00000203881 505 ntBASIC12.26□□□□□ -0.45
TnfP06804 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.26□□□□□ -0.45
TnfP06804 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
TnfP06804 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
TnfP06804 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TnfP06804 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TnfP06804 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.26□□□□□ -0.45
TnfP06804 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms