Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.17□□□□□ -0.78
P04224 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.17□□□□□ -0.78
P04224 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P04224 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.17□□□□□ -0.78
P04224 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.17□□□□□ -0.78
P04224 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
P04224 Gm43818-201ENSMUST00000200605 466 ntBASIC10.17□□□□□ -0.78
P04224 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.17□□□□□ -0.78
P04224 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.17□□□□□ -0.78
P04224 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.17□□□□□ -0.78
P04224 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.17□□□□□ -0.78
P04224 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P04224 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.17□□□□□ -0.78
P04224 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P04224 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.17□□□□□ -0.78
P04224 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.17□□□□□ -0.78
P04224 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P04224 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.17□□□□□ -0.78
P04224 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
P04224 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.17□□□□□ -0.78
P04224 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.17□□□□□ -0.78
P04224 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
P04224 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
P04224 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.16□□□□□ -0.78
P04224 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.16□□□□□ -0.78
P04224 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
P04224 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm24830-201ENSMUST00000102024 166 ntBASIC10.16□□□□□ -0.78
P04224 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.16□□□□□ -0.78
P04224 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm16177-201ENSMUST00000120728 718 ntBASIC10.16□□□□□ -0.78
P04224 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.16□□□□□ -0.78
P04224 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.16□□□□□ -0.78
P04224 Gm27023-201ENSMUST00000182372 285 ntBASIC10.16□□□□□ -0.78
P04224 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.16□□□□□ -0.78
P04224 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.16□□□□□ -0.78
P04224 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.16□□□□□ -0.78
P04224 Gm5781-201ENSMUST00000219792 443 ntBASIC10.16□□□□□ -0.78
P04224 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm26232-201ENSMUST00000083360 166 ntBASIC10.16□□□□□ -0.78
P04224 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.16□□□□□ -0.78
P04224 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
P04224 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
P04224 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04224 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P04224 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.16□□□□□ -0.78
P04224 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P04224 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
P04224 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04224 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.16□□□□□ -0.78
P04224 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04224 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04224 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms