Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm12463-201ENSMUST00000118271 849 ntBASIC10.91□□□□□ -0.66
Krt1P04104 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.91□□□□□ -0.66
Krt1P04104 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.91□□□□□ -0.66
Krt1P04104 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.91□□□□□ -0.66
Krt1P04104 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.91□□□□□ -0.66
Krt1P04104 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.91□□□□□ -0.66
Krt1P04104 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.91□□□□□ -0.66
Krt1P04104 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Krt1P04104 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.91□□□□□ -0.66
Krt1P04104 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.91□□□□□ -0.66
Krt1P04104 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.91□□□□□ -0.66
Krt1P04104 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.91□□□□□ -0.66
Krt1P04104 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.91□□□□□ -0.66
Krt1P04104 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.91□□□□□ -0.66
Krt1P04104 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Krt1P04104 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt1P04104 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.9□□□□□ -0.66
Krt1P04104 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.9□□□□□ -0.66
Krt1P04104 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.9□□□□□ -0.66
Krt1P04104 Gm4984-201ENSMUST00000115987 360 ntBASIC10.9□□□□□ -0.66
Krt1P04104 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.9□□□□□ -0.66
Krt1P04104 Gm13570-201ENSMUST00000140763 309 ntBASIC10.9□□□□□ -0.66
Krt1P04104 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Krt1P04104 Gm4271-201ENSMUST00000174444 973 ntBASIC10.9□□□□□ -0.66
Krt1P04104 Gm27701-201ENSMUST00000184498 110 ntBASIC10.9□□□□□ -0.66
Krt1P04104 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.9□□□□□ -0.66
Krt1P04104 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Gm15823-201ENSMUST00000064305 670 ntBASIC10.9□□□□□ -0.66
Krt1P04104 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.9□□□□□ -0.66
Krt1P04104 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Krt1P04104 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Krt1P04104 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt1P04104 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt1P04104 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.9□□□□□ -0.67
Krt1P04104 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Krt1P04104 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.9□□□□□ -0.67
Krt1P04104 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
Krt1P04104 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.89□□□□□ -0.67
Krt1P04104 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.89□□□□□ -0.67
Krt1P04104 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.89□□□□□ -0.67
Krt1P04104 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.89□□□□□ -0.67
Krt1P04104 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Krt1P04104 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Krt1P04104 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.89□□□□□ -0.67
Krt1P04104 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt1P04104 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Krt1P04104 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms