Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Rps4l-202ENSMUST00000204242 789 ntBASIC11.91□□□□□ -0.5
CopeO89079 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CopeO89079 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.91□□□□□ -0.5
CopeO89079 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.91□□□□□ -0.5
CopeO89079 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.9□□□□□ -0.5
CopeO89079 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CopeO89079 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CopeO89079 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.9□□□□□ -0.5
CopeO89079 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
CopeO89079 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Gm11222-201ENSMUST00000119005 738 ntBASIC11.9□□□□□ -0.5
CopeO89079 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CopeO89079 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.9□□□□□ -0.5
CopeO89079 Gm28937-201ENSMUST00000185413 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Gm29400-201ENSMUST00000187208 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Gm28662-201ENSMUST00000188446 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Gm28251-201ENSMUST00000188835 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Gm37318-201ENSMUST00000194325 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Gm38017-201ENSMUST00000194768 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Gm37287-201ENSMUST00000195449 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Gm37793-201ENSMUST00000195548 695 ntBASIC11.9□□□□□ -0.5
CopeO89079 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.9□□□□□ -0.5
CopeO89079 Gm45598-202ENSMUST00000210719 986 ntBASIC11.9□□□□□ -0.5
CopeO89079 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.9□□□□□ -0.5
CopeO89079 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.9□□□□□ -0.5
CopeO89079 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CopeO89079 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.9□□□□□ -0.5
CopeO89079 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.9□□□□□ -0.5
CopeO89079 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopeO89079 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
CopeO89079 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CopeO89079 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CopeO89079 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CopeO89079 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CopeO89079 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.89□□□□□ -0.51
CopeO89079 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CopeO89079 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.89□□□□□ -0.51
CopeO89079 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CopeO89079 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.89□□□□□ -0.51
CopeO89079 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.89□□□□□ -0.51
CopeO89079 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.89□□□□□ -0.51
CopeO89079 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.89□□□□□ -0.51
CopeO89079 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm23270-201ENSMUST00000104055 131 ntBASIC11.89□□□□□ -0.51
CopeO89079 Gm26286-201ENSMUST00000104166 134 ntBASIC11.89□□□□□ -0.51
CopeO89079 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CopeO89079 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm3329-201ENSMUST00000159873 556 ntBASIC11.89□□□□□ -0.51
CopeO89079 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.89□□□□□ -0.51
CopeO89079 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.89□□□□□ -0.51
CopeO89079 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm6450-201ENSMUST00000200896 574 ntBASIC11.89□□□□□ -0.51
CopeO89079 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.89□□□□□ -0.51
CopeO89079 Gm43962-201ENSMUST00000203898 190 ntBASIC11.89□□□□□ -0.51
CopeO89079 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CopeO89079 Olfr284-202ENSMUST00000206647 966 ntBASIC11.89□□□□□ -0.51
CopeO89079 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.89□□□□□ -0.51
CopeO89079 Gzmn-202ENSMUST00000225535 989 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms