Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc1a6O35544 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Slc1a6O35544 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Slc1a6O35544 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc1a6O35544 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc1a6O35544 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc1a6O35544 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc1a6O35544 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm13786-201ENSMUST00000122371 333 ntBASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.39□□□□□ -0.59
Slc1a6O35544 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.39□□□□□ -0.59
Slc1a6O35544 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.39□□□□□ -0.59
Slc1a6O35544 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.39□□□□□ -0.59
Slc1a6O35544 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Slc1a6O35544 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.39□□□□□ -0.59
Slc1a6O35544 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc1a6O35544 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc1a6O35544 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Gm15547-201ENSMUST00000122152 333 ntBASIC11.38□□□□□ -0.59
Slc1a6O35544 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.38□□□□□ -0.59
Slc1a6O35544 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.38□□□□□ -0.59
Slc1a6O35544 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms