Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.4□□□□□ -0.42
Cpsf2O35218 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Gm32999-201ENSMUST00000192693 562 ntBASIC12.4□□□□□ -0.42
Cpsf2O35218 Gm44651-201ENSMUST00000207343 372 ntBASIC12.4□□□□□ -0.42
Cpsf2O35218 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Gm10254-201ENSMUST00000052888 867 ntBASIC12.4□□□□□ -0.42
Cpsf2O35218 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf2O35218 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf2O35218 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf2O35218 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf2O35218 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf2O35218 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf2O35218 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.4□□□□□ -0.43
Cpsf2O35218 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf2O35218 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf2O35218 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf2O35218 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.39□□□□□ -0.43
Cpsf2O35218 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.39□□□□□ -0.43
Cpsf2O35218 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf2O35218 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.39□□□□□ -0.43
Cpsf2O35218 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cpsf2O35218 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.39□□□□□ -0.43
Cpsf2O35218 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.39□□□□□ -0.43
Cpsf2O35218 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.39□□□□□ -0.43
Cpsf2O35218 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.39□□□□□ -0.43
Cpsf2O35218 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf2O35218 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf2O35218 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf2O35218 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.38□□□□□ -0.43
Cpsf2O35218 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.38□□□□□ -0.43
Cpsf2O35218 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.38□□□□□ -0.43
Cpsf2O35218 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.38□□□□□ -0.43
Cpsf2O35218 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf2O35218 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf2O35218 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf2O35218 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf2O35218 Gm26286-201ENSMUST00000104166 134 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms