Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm3096-201ENSMUST00000185770 364 ntBASIC10.35□□□□□ -0.75
Alx4O35137 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.35□□□□□ -0.75
Alx4O35137 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.35□□□□□ -0.75
Alx4O35137 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.35□□□□□ -0.75
Alx4O35137 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.35□□□□□ -0.75
Alx4O35137 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.35□□□□□ -0.75
Alx4O35137 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.35□□□□□ -0.75
Alx4O35137 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.35□□□□□ -0.75
Alx4O35137 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.35□□□□□ -0.75
Alx4O35137 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.35□□□□□ -0.75
Alx4O35137 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Gm25857-201ENSMUST00000082788 129 ntBASIC10.35□□□□□ -0.75
Alx4O35137 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Alx4O35137 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.35□□□□□ -0.75
Alx4O35137 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Alx4O35137 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Alx4O35137 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Alx4O35137 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Alx4O35137 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Alx4O35137 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Gm5187-201ENSMUST00000117317 991 ntBASIC10.34□□□□□ -0.75
Alx4O35137 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.34□□□□□ -0.75
Alx4O35137 Gm13829-201ENSMUST00000119600 138 ntBASIC10.34□□□□□ -0.75
Alx4O35137 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Alx4O35137 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.34□□□□□ -0.75
Alx4O35137 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.34□□□□□ -0.75
Alx4O35137 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.34□□□□□ -0.75
Alx4O35137 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Alx4O35137 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.34□□□□□ -0.75
Alx4O35137 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Alx4O35137 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Alx4O35137 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Alx4O35137 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.33□□□□□ -0.76
Alx4O35137 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.33□□□□□ -0.76
Alx4O35137 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms