Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 n-R5s138-201ENSMUST00000179476 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s122-201ENSMUST00000179500 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s143-201ENSMUST00000179542 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s107-201ENSMUST00000179704 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm26391-201ENSMUST00000179843 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s110-201ENSMUST00000179995 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s128-201ENSMUST00000180096 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s124-201ENSMUST00000180334 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 AC159196.1-201ENSMUST00000225524 377 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm24089-201ENSMUST00000093696 109 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gm18210-201ENSMUST00000209001 1524 ntBASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gm43167-201ENSMUST00000202001 1606 ntBASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gm13039-201ENSMUST00000118638 794 ntBASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gm7589-201ENSMUST00000085631 534 ntBASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Pcf11G3X9Z4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm12906-201ENSMUST00000154610 441 ntBASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm25569-201ENSMUST00000157175 131 ntBASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm18014-201ENSMUST00000183369 817 ntBASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Mir6923-201ENSMUST00000184592 72 ntBASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm29763-201ENSMUST00000205306 616 ntBASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm43174-201ENSMUST00000195914 2445 ntBASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcf11G3X9Z4 Gm5944-201ENSMUST00000118182 1001 ntBASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Gm9916-201ENSMUST00000192943 1228 ntBASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Gm11952-201ENSMUST00000121172 821 ntBASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Mir1893-201ENSMUST00000122565 83 ntBASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Gm9507-202ENSMUST00000180157 654 ntBASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms