Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm44913-201ENSMUST00000208060 2990 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm12337-201ENSMUST00000119634 400 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm7985-201ENSMUST00000183329 981 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm37782-201ENSMUST00000194879 678 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm43547-201ENSMUST00000197729 328 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm6331-201ENSMUST00000217890 450 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm8181-201ENSMUST00000062242 669 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.99□□□□□ -0.17
NpcdF8VQB8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NpcdF8VQB8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.98□□□□□ -0.17
NpcdF8VQB8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm23612-201ENSMUST00000103823 110 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm25562-201ENSMUST00000104608 133 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm16030-201ENSMUST00000159098 603 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm23576-201ENSMUST00000179918 110 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm8197-202ENSMUST00000193422 934 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm34379-201ENSMUST00000195036 290 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.98□□□□□ -0.17
NpcdF8VQB8 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.98□□□□□ -0.17
NpcdF8VQB8 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NpcdF8VQB8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Gm15196-201ENSMUST00000121406 482 ntBASIC13.97□□□□□ -0.17
NpcdF8VQB8 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Gm7069-201ENSMUST00000182418 1008 ntBASIC13.97□□□□□ -0.17
NpcdF8VQB8 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC13.97□□□□□ -0.17
NpcdF8VQB8 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NpcdF8VQB8 Gm44216-201ENSMUST00000203942 157 ntBASIC13.97□□□□□ -0.17
NpcdF8VQB8 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.97□□□□□ -0.17
NpcdF8VQB8 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms