Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm13022-201ENSMUST00000121181 285 ntBASIC13.88□□□□□ -0.19
Ube4aE9Q735 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.88□□□□□ -0.19
Ube4aE9Q735 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm35713-201ENSMUST00000210516 199 ntBASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Lect2-202ENSMUST00000225183 823 ntBASIC13.88□□□□□ -0.19
Ube4aE9Q735 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm15197-201ENSMUST00000120526 478 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm43671-201ENSMUST00000200422 433 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm25201-201ENSMUST00000083093 170 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.87□□□□□ -0.19
Ube4aE9Q735 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube4aE9Q735 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm11980-201ENSMUST00000121445 986 ntBASIC13.86□□□□□ -0.19
Ube4aE9Q735 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm8723-201ENSMUST00000166076 820 ntBASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm8701-201ENSMUST00000169259 874 ntBASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm18776-201ENSMUST00000188833 654 ntBASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm43966-201ENSMUST00000203301 612 ntBASIC13.86□□□□□ -0.19
Ube4aE9Q735 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4aE9Q735 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms