Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmf1B9EKI3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmf1B9EKI3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.68■□□□□ 0.1
Tmf1B9EKI3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm44755-201ENSMUST00000207830 2102 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm37542-201ENSMUST00000192563 2832 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm6722-201ENSMUST00000221586 390 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmf1B9EKI3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm13047-201ENSMUST00000117116 815 ntBASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm6485-201ENSMUST00000160676 439 ntBASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Snora73b-201ENSMUST00000083419 205 ntBASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm23105-201ENSMUST00000083719 134 ntBASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmf1B9EKI3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Gm44573-201ENSMUST00000191753 2370 ntBASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Gm27910-201ENSMUST00000185004 107 ntBASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmf1B9EKI3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tmf1B9EKI3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Tmf1B9EKI3 Gm14942-201ENSMUST00000119642 336 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms