Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm8502-201ENSMUST00000185708 901 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm21147-201ENSMUST00000186046 913 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm8510-201ENSMUST00000189202 895 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm2316-201ENSMUST00000190613 921 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.84□□□□□ -0.35
Brpf3B2KF05 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Brpf3B2KF05 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Brpf3B2KF05 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.83□□□□□ -0.35
Brpf3B2KF05 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Gm10434-201ENSMUST00000101158 471 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 Mir1247-201ENSMUST00000116706 82 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 Gm11478-201ENSMUST00000117851 599 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 Gm5370-201ENSMUST00000187187 574 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 Gm18515-201ENSMUST00000219755 797 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.83□□□□□ -0.36
Brpf3B2KF05 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.83□□□□□ -0.36
Brpf3B2KF05 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.82□□□□□ -0.36
Brpf3B2KF05 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.82□□□□□ -0.36
Brpf3B2KF05 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Brpf3B2KF05 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms