Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm43820-201ENSMUST00000199414 3346 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Gm12928-201ENSMUST00000117115 573 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Gm15703-201ENSMUST00000120250 880 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Gm16479-201ENSMUST00000121706 932 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Gm2495-201ENSMUST00000191160 466 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trem1Q9JKE2 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Snord83b-201ENSMUST00000104546 94 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Mir6392-201ENSMUST00000184924 108 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.34□□□□□ -0.75
Trem1Q9JKE2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.34□□□□□ -0.75
Trem1Q9JKE2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms