Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm17040-202ENSMUST00000170597 889 ntBASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Gm10288-201ENSMUST00000084614 537 ntBASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Gm21811-201ENSMUST00000096485 930 ntBASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp4bQ9D8B3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm24891-201ENSMUST00000104391 136 ntBASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm3329-201ENSMUST00000159873 556 ntBASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm45186-201ENSMUST00000206874 478 ntBASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm45575-201ENSMUST00000210283 548 ntBASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Chmp4bQ9D8B3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm12501-201ENSMUST00000119163 529 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm13263-201ENSMUST00000121271 838 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm4857-201ENSMUST00000192718 785 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm4482-201ENSMUST00000200876 742 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm6867-201ENSMUST00000219165 425 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp4bQ9D8B3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms