Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
U2af1Q9D883 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
U2af1Q9D883 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
U2af1Q9D883 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
U2af1Q9D883 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
U2af1Q9D883 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Erich3-203ENSMUST00000189969 3460 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm25076-201ENSMUST00000104098 132 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm16071-201ENSMUST00000119589 793 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm23771-201ENSMUST00000178702 110 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm27910-201ENSMUST00000185004 107 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm17826-201ENSMUST00000189720 798 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm9645-201ENSMUST00000197131 792 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm44980-201ENSMUST00000205826 314 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm9463-201ENSMUST00000206707 601 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm8285-201ENSMUST00000208293 759 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Gm5996-201ENSMUST00000211110 718 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Lect2-202ENSMUST00000225183 823 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Snora73b-201ENSMUST00000083419 205 ntBASIC15.23■□□□□ 0.03
U2af1Q9D883 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
U2af1Q9D883 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
U2af1Q9D883 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Gm11246-201ENSMUST00000120880 345 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.22■□□□□ 0.03
U2af1Q9D883 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Gm6485-201ENSMUST00000160676 439 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Gm7741-201ENSMUST00000181445 989 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.22■□□□□ 0.03
U2af1Q9D883 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Gm44190-201ENSMUST00000205083 1401 ntBASIC15.22■□□□□ 0.03
U2af1Q9D883 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
U2af1Q9D883 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
U2af1Q9D883 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 AC154639.1-201ENSMUST00000224393 2849 ntBASIC15.21■□□□□ 0.03
U2af1Q9D883 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC15.21■□□□□ 0.03
U2af1Q9D883 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms