Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Gm45784-201ENSMUST00000188360 142 ntBASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Gm36991-201ENSMUST00000191800 648 ntBASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Gm43133-201ENSMUST00000197472 463 ntBASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ssu72Q9CY97 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm17150-201ENSMUST00000165577 381 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm37597-201ENSMUST00000191853 382 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm2594-201ENSMUST00000214774 742 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.5□□□□□ -0.57
Ssu72Q9CY97 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.49□□□□□ -0.57
Ssu72Q9CY97 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Gm13226-201ENSMUST00000117838 404 ntBASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Gm6266-201ENSMUST00000203844 806 ntBASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Gm7046-201ENSMUST00000221351 977 ntBASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms