Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm7Q9CQQ8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm7Q9CQQ8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.72□□□□□ -0.53
Lsm7Q9CQQ8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm7Q9CQQ8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm7Q9CQQ8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm7Q9CQQ8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.72□□□□□ -0.53
Lsm7Q9CQQ8 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm16071-201ENSMUST00000119589 793 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm12208-201ENSMUST00000122004 163 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm17826-201ENSMUST00000189720 798 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm8365-201ENSMUST00000197334 648 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Gm5451-201ENSMUST00000080545 579 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Snora73b-201ENSMUST00000083419 205 ntBASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm7Q9CQQ8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm7Q9CQQ8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm25076-201ENSMUST00000104098 132 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm11451-201ENSMUST00000118946 630 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm17877-201ENSMUST00000192578 814 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm38314-201ENSMUST00000195709 625 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm7504-201ENSMUST00000201449 424 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm35960-201ENSMUST00000202712 767 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm2875-201ENSMUST00000211333 360 ntBASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms