Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm37666-201ENSMUST00000194110 866 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm45433-201ENSMUST00000209386 247 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.37□□□□□ -0.59
Trim16Q99PP9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trim16Q99PP9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm2383-201ENSMUST00000181461 807 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm18056-201ENSMUST00000207670 568 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm18061-201ENSMUST00000208350 562 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm18063-201ENSMUST00000208529 568 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm18052-201ENSMUST00000208750 559 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.36□□□□□ -0.59
Trim16Q99PP9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim16Q99PP9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim16Q99PP9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim16Q99PP9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim16Q99PP9 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.35□□□□□ -0.59
Trim16Q99PP9 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim16Q99PP9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim16Q99PP9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim16Q99PP9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim16Q99PP9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms