Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Mir433-201ENSMUST00000093564 124 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm8731-201ENSMUST00000118088 412 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm18056-201ENSMUST00000207670 568 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm18061-201ENSMUST00000208350 562 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm18063-201ENSMUST00000208529 568 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm18052-201ENSMUST00000208750 559 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm7848-201ENSMUST00000210739 718 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb6Q91XZ4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb6Q91XZ4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb6Q91XZ4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.9□□□□□ -0.51
Pcdhb6Q91XZ4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb6Q91XZ4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Pcdhb6Q91XZ4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Pcdhb6Q91XZ4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Gm14058-201ENSMUST00000116082 735 ntBASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Gm11941-201ENSMUST00000119904 610 ntBASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Btrc-209ENSMUST00000224478 2194 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms