Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc38Q8CDN8 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm27627-201ENSMUST00000183644 150 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm27320-201ENSMUST00000184892 109 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc38Q8CDN8 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm25668-201ENSMUST00000157700 129 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm17376-201ENSMUST00000166016 84 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm29615-201ENSMUST00000185371 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm28224-201ENSMUST00000186078 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm29001-201ENSMUST00000186177 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm28292-201ENSMUST00000186593 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm28101-201ENSMUST00000187608 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm29076-201ENSMUST00000187689 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm28302-201ENSMUST00000187931 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm28646-201ENSMUST00000188220 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm28205-201ENSMUST00000189177 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm29032-201ENSMUST00000189797 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm28695-201ENSMUST00000190300 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm37448-201ENSMUST00000192795 697 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm43184-201ENSMUST00000197247 542 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms