Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynpoQ8CC35 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynpoQ8CC35 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynpoQ8CC35 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.28□□□□□ -0.6
SynpoQ8CC35 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynpoQ8CC35 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.28□□□□□ -0.6
SynpoQ8CC35 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.28□□□□□ -0.6
SynpoQ8CC35 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynpoQ8CC35 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynpoQ8CC35 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SynpoQ8CC35 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynpoQ8CC35 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.27□□□□□ -0.6
SynpoQ8CC35 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynpoQ8CC35 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynpoQ8CC35 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynpoQ8CC35 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SynpoQ8CC35 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm23596-201ENSMUST00000104304 132 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm13408-201ENSMUST00000119822 798 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm12196-201ENSMUST00000120954 262 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm15432-201ENSMUST00000121106 195 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm13935-201ENSMUST00000121859 798 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Rprl1-201ENSMUST00000158050 327 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm3508-201ENSMUST00000186012 792 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm45118-201ENSMUST00000208928 825 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm4157-201ENSMUST00000211647 679 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm5369-201ENSMUST00000217499 588 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.27□□□□□ -0.61
SynpoQ8CC35 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynpoQ8CC35 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm11941-201ENSMUST00000119904 610 ntBASIC11.26□□□□□ -0.61
SynpoQ8CC35 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.26□□□□□ -0.61
SynpoQ8CC35 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm807-202ENSMUST00000224929 408 ntBASIC11.26□□□□□ -0.61
SynpoQ8CC35 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms