Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm12241-201ENSMUST00000118330 726 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm11439-201ENSMUST00000118598 409 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm27046-201ENSMUST00000182160 463 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm45598-202ENSMUST00000210719 986 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Gm25857-201ENSMUST00000082788 129 ntBASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2bQ8BJF9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm11930-201ENSMUST00000117788 190 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm11511-201ENSMUST00000118146 540 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm14109-201ENSMUST00000118814 309 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 AY702102-202ENSMUST00000194651 1173 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms