Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm11439-201ENSMUST00000118598 409 ntBASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm8885-201ENSMUST00000189382 598 ntBASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.22□□□□□ -0.61
Rnf38Q8BI21 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm22323-201ENSMUST00000103832 109 ntBASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm19287-201ENSMUST00000203190 358 ntBASIC11.21□□□□□ -0.61
Rnf38Q8BI21 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf38Q8BI21 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf38Q8BI21 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms