Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm7857-201ENSMUST00000117957 358 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm5616-201ENSMUST00000165252 384 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm8741-201ENSMUST00000174736 384 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm8420-201ENSMUST00000097103 598 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm23949-201ENSMUST00000104027 127 ntBASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm4909-201ENSMUST00000118749 794 ntBASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm14441-201ENSMUST00000121960 540 ntBASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Mir7070-201ENSMUST00000183657 86 ntBASIC13.6□□□□□ -0.23
Samm50Q8BGH2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms