Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx55Q6ZPL9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm11700-201ENSMUST00000119409 403 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm12906-201ENSMUST00000154610 441 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm9162-201ENSMUST00000182081 991 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm27390-201ENSMUST00000184516 176 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Mir7035-201ENSMUST00000184713 82 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Trav11n-201ENSMUST00000200113 343 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm43249-201ENSMUST00000200464 458 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm5340-201ENSMUST00000203733 880 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Id2-203ENSMUST00000222667 958 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx55Q6ZPL9 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms