Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm1866-201ENSMUST00000120701 477 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm24954-201ENSMUST00000178831 110 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm10925-201ENSMUST00000189941 678 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm37469-201ENSMUST00000193728 890 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm34379-201ENSMUST00000195036 290 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 AC132104.1-201ENSMUST00000213615 260 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Gm26670-202ENSMUST00000226862 340 ntBASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf8Q6DID3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf8Q6DID3 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.71□□□□□ -0.22
Scaf8Q6DID3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf8Q6DID3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf8Q6DID3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Scaf8Q6DID3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf8Q6DID3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf8Q6DID3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm12247-201ENSMUST00000117585 670 ntBASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm15329-201ENSMUST00000121408 155 ntBASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf8Q6DID3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm14395-201ENSMUST00000120494 563 ntBASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm15549-201ENSMUST00000121595 622 ntBASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm17221-201ENSMUST00000163909 481 ntBASIC13.69□□□□□ -0.22
Scaf8Q6DID3 Gm17073-201ENSMUST00000168069 556 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms