Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.8□□□□□ -0.36
Ecm1Q61508 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm7541-201ENSMUST00000118361 535 ntBASIC12.8□□□□□ -0.36
Ecm1Q61508 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm26976-201ENSMUST00000182929 908 ntBASIC12.8□□□□□ -0.36
Ecm1Q61508 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm19640-201ENSMUST00000214849 464 ntBASIC12.8□□□□□ -0.36
Ecm1Q61508 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.8□□□□□ -0.36
Ecm1Q61508 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.8□□□□□ -0.36
Ecm1Q61508 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ecm1Q61508 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.8□□□□□ -0.36
Ecm1Q61508 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ecm1Q61508 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
Ecm1Q61508 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ecm1Q61508 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms