Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm19587-201ENSMUST00000191395 545 ntBASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm14274-201ENSMUST00000117182 615 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm12943-201ENSMUST00000119616 210 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm24248-201ENSMUST00000157321 322 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm7504-201ENSMUST00000201449 424 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx49Q4FZF3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Gm22379-201ENSMUST00000157480 131 ntBASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.54□□□□□ -0.24
Ddx49Q4FZF3 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms