Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.18□□□□□ -0.3
Gm28047Q3US59 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.18□□□□□ -0.3
Gm28047Q3US59 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.18□□□□□ -0.3
Gm28047Q3US59 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Gm10807-201ENSMUST00000177134 795 ntBASIC13.18□□□□□ -0.3
Gm28047Q3US59 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.18□□□□□ -0.3
Gm28047Q3US59 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.18□□□□□ -0.3
Gm28047Q3US59 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.18□□□□□ -0.3
Gm28047Q3US59 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28047Q3US59 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm12196-201ENSMUST00000120954 262 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm26083-201ENSMUST00000157904 193 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm20495-201ENSMUST00000173902 235 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm45575-201ENSMUST00000210283 548 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.17□□□□□ -0.3
Gm28047Q3US59 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28047Q3US59 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28047Q3US59 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms