Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm15516-201ENSMUST00000117292 193 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm6028-201ENSMUST00000077111 574 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm42467-201ENSMUST00000202954 1447 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm8163-201ENSMUST00000122020 1060 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm5996-201ENSMUST00000211110 718 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm45795-201ENSMUST00000211847 400 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 AC116596.1-201ENSMUST00000228112 1762 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 AC140209.1-203ENSMUST00000227412 1524 ntBASIC10.34□□□□□ -0.75
Chd8Q09XV5 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC10.34□□□□□ -0.75
Chd8Q09XV5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms