Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.76□□□□□ -0.37
Lig3P97386 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.76□□□□□ -0.37
Lig3P97386 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lig3P97386 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lig3P97386 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.76□□□□□ -0.37
Lig3P97386 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lig3P97386 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lig3P97386 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.76□□□□□ -0.37
Lig3P97386 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lig3P97386 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.76□□□□□ -0.37
Lig3P97386 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Lig3P97386 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lig3P97386 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lig3P97386 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lig3P97386 Gm11246-201ENSMUST00000120880 345 ntBASIC12.75□□□□□ -0.37
Lig3P97386 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.75□□□□□ -0.37
Lig3P97386 Mir6998-201ENSMUST00000183343 64 ntBASIC12.75□□□□□ -0.37
Lig3P97386 Mir7076-201ENSMUST00000183519 74 ntBASIC12.75□□□□□ -0.37
Lig3P97386 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.75□□□□□ -0.37
Lig3P97386 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lig3P97386 Gm6867-201ENSMUST00000219165 425 ntBASIC12.75□□□□□ -0.37
Lig3P97386 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.75□□□□□ -0.37
Lig3P97386 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Snora73b-201ENSMUST00000083419 205 ntBASIC12.75□□□□□ -0.37
Lig3P97386 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.75□□□□□ -0.37
Lig3P97386 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.75□□□□□ -0.37
Lig3P97386 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lig3P97386 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lig3P97386 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.74□□□□□ -0.37
Lig3P97386 Gm11989-201ENSMUST00000117240 672 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Gm11362-201ENSMUST00000118838 850 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.74□□□□□ -0.37
Lig3P97386 Gm3793-201ENSMUST00000204973 672 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Gm2517-201ENSMUST00000215651 348 ntBASIC12.74□□□□□ -0.37
Lig3P97386 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms