Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim43cP86449 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim43cP86449 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim43cP86449 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Gm25148-201ENSMUST00000104611 123 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Gm14193-201ENSMUST00000105067 153 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Gm3150-201ENSMUST00000166418 204 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Gm37246-201ENSMUST00000192665 835 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Gm43966-201ENSMUST00000203301 612 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.61□□□□□ -0.39
Trim43cP86449 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim43cP86449 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trim43cP86449 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim43cP86449 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim43cP86449 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43cP86449 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trim43cP86449 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trim43cP86449 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.6□□□□□ -0.39
Trim43cP86449 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim43cP86449 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim43cP86449 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.6□□□□□ -0.39
Trim43cP86449 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.6□□□□□ -0.39
Trim43cP86449 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43cP86449 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.6□□□□□ -0.39
Trim43cP86449 Gm9555-201ENSMUST00000200908 583 ntBASIC12.6□□□□□ -0.39
Trim43cP86449 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43cP86449 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim43cP86449 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim43cP86449 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43cP86449 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms