Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC9.73□□□□□ -0.85
SgcaP82350 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.73□□□□□ -0.85
SgcaP82350 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.73□□□□□ -0.85
SgcaP82350 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Gm13736-201ENSMUST00000119272 253 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Gm11700-201ENSMUST00000119409 403 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Gm15610-201ENSMUST00000120584 195 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Gm8652-201ENSMUST00000181363 964 ntBASIC9.73□□□□□ -0.85
SgcaP82350 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.73□□□□□ -0.85
SgcaP82350 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Gm17931-201ENSMUST00000208132 634 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Gm5356-201ENSMUST00000093326 615 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Gm37593-201ENSMUST00000191669 3254 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SgcaP82350 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.73□□□□□ -0.85
SgcaP82350 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcaP82350 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcaP82350 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SgcaP82350 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcaP82350 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SgcaP82350 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SgcaP82350 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SgcaP82350 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.72□□□□□ -0.85
SgcaP82350 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Gm6244-201ENSMUST00000178732 841 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Gm24196-201ENSMUST00000179161 110 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
SgcaP82350 Gm5706-201ENSMUST00000181525 993 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.72□□□□□ -0.85
SgcaP82350 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms