Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SgcbP82349 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.41□□□□□ -0.74
SgcbP82349 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Gm12165-201ENSMUST00000117047 342 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Gm11700-201ENSMUST00000119409 403 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Gm14913-201ENSMUST00000120011 1093 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Gm15432-201ENSMUST00000121106 195 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Gm15566-201ENSMUST00000121130 590 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
SgcbP82349 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Gm27530-201ENSMUST00000184096 98 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.41□□□□□ -0.74
SgcbP82349 Gm29499-201ENSMUST00000189151 486 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Gm28329-201ENSMUST00000191208 689 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Gm29171-201ENSMUST00000191397 486 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.41□□□□□ -0.74
SgcbP82349 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SgcbP82349 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcbP82349 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.41□□□□□ -0.74
SgcbP82349 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
SgcbP82349 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Gm11783-201ENSMUST00000119549 885 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.4□□□□□ -0.74
SgcbP82349 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.4□□□□□ -0.74
SgcbP82349 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC10.4□□□□□ -0.74
SgcbP82349 Gm23699-201ENSMUST00000158835 135 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
SgcbP82349 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SgcbP82349 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.4□□□□□ -0.74
SgcbP82349 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Gm5714-201ENSMUST00000197343 566 ntBASIC10.4□□□□□ -0.74
SgcbP82349 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.4□□□□□ -0.74
SgcbP82349 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.4□□□□□ -0.74
SgcbP82349 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms