Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.58□□□□□ -0.4
CiitaP79621 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.58□□□□□ -0.4
CiitaP79621 Gm44329-201ENSMUST00000197469 112 ntBASIC12.58□□□□□ -0.4
CiitaP79621 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Lect2-202ENSMUST00000225183 823 ntBASIC12.58□□□□□ -0.4
CiitaP79621 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CiitaP79621 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Gm23105-201ENSMUST00000083719 134 ntBASIC12.58□□□□□ -0.4
CiitaP79621 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.58□□□□□ -0.4
CiitaP79621 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CiitaP79621 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.57□□□□□ -0.4
CiitaP79621 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CiitaP79621 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.57□□□□□ -0.4
CiitaP79621 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Gm14395-201ENSMUST00000120494 563 ntBASIC12.57□□□□□ -0.4
CiitaP79621 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.57□□□□□ -0.4
CiitaP79621 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CiitaP79621 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CiitaP79621 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CiitaP79621 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.57□□□□□ -0.4
CiitaP79621 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Gm28388-201ENSMUST00000186262 437 ntBASIC12.57□□□□□ -0.4
CiitaP79621 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.57□□□□□ -0.4
CiitaP79621 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CiitaP79621 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CiitaP79621 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CiitaP79621 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CiitaP79621 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CiitaP79621 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CiitaP79621 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CiitaP79621 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
CiitaP79621 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 Gm1848-201ENSMUST00000120711 789 ntBASIC12.56□□□□□ -0.4
CiitaP79621 Gm15329-201ENSMUST00000121408 155 ntBASIC12.56□□□□□ -0.4
CiitaP79621 Gm14665-201ENSMUST00000122294 557 ntBASIC12.56□□□□□ -0.4
CiitaP79621 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.56□□□□□ -0.4
CiitaP79621 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.56□□□□□ -0.4
CiitaP79621 Mir7032-201ENSMUST00000185154 79 ntBASIC12.56□□□□□ -0.4
CiitaP79621 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.56□□□□□ -0.4
CiitaP79621 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Gm5996-201ENSMUST00000211110 718 ntBASIC12.56□□□□□ -0.4
CiitaP79621 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms