Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.49□□□□□ -0.57
Crnkl1P63154 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Crnkl1P63154 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.49□□□□□ -0.57
Crnkl1P63154 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.49□□□□□ -0.57
Crnkl1P63154 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Crnkl1P63154 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.49□□□□□ -0.57
Crnkl1P63154 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crnkl1P63154 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.49□□□□□ -0.57
Crnkl1P63154 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.48□□□□□ -0.57
Crnkl1P63154 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm18304-201ENSMUST00000189162 546 ntBASIC11.48□□□□□ -0.57
Crnkl1P63154 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm24526-201ENSMUST00000082921 158 ntBASIC11.48□□□□□ -0.57
Crnkl1P63154 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.48□□□□□ -0.57
Crnkl1P63154 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.48□□□□□ -0.57
Crnkl1P63154 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Crnkl1P63154 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crnkl1P63154 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.47□□□□□ -0.57
Crnkl1P63154 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.47□□□□□ -0.57
Crnkl1P63154 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm10434-201ENSMUST00000101158 471 ntBASIC11.47□□□□□ -0.57
Crnkl1P63154 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm11793-201ENSMUST00000120433 981 ntBASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm11964-201ENSMUST00000120982 444 ntBASIC11.47□□□□□ -0.57
Crnkl1P63154 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm24548-201ENSMUST00000158650 108 ntBASIC11.47□□□□□ -0.57
Crnkl1P63154 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms