Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.21□□□□□ -0.78
Lsm6P62313 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Lsm6P62313 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Lsm6P62313 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lsm6P62313 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Lsm6P62313 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.2□□□□□ -0.78
Lsm6P62313 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.2□□□□□ -0.78
Lsm6P62313 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Lsm6P62313 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Lsm6P62313 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Gm5714-201ENSMUST00000197343 566 ntBASIC10.2□□□□□ -0.78
Lsm6P62313 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Lsm6P62313 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.2□□□□□ -0.78
Lsm6P62313 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.2□□□□□ -0.78
Lsm6P62313 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Lsm6P62313 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm6P62313 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lsm6P62313 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Lsm6P62313 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm25881-201ENSMUST00000157783 103 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms