Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Gm25148-201ENSMUST00000104611 123 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Lmo4P61969 Gm14270-201ENSMUST00000118388 846 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm8302-201ENSMUST00000119217 852 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm14219-201ENSMUST00000120414 288 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.36□□□□□ -0.91
Lmo4P61969 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.36□□□□□ -0.91
Lmo4P61969 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.36□□□□□ -0.91
Lmo4P61969 Gm44008-201ENSMUST00000204345 412 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Gm39288-201ENSMUST00000210554 446 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm45856-201ENSMUST00000212752 416 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Gm5805-201ENSMUST00000072779 456 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm25517-201ENSMUST00000083865 134 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Lmo4P61969 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Lmo4P61969 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Lmo4P61969 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
Lmo4P61969 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Lmo4P61969 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Lmo4P61969 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm14807-201ENSMUST00000116640 983 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm23218-201ENSMUST00000158124 276 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm9135-201ENSMUST00000182963 990 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm29067-201ENSMUST00000190821 470 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.35□□□□□ -0.91
Lmo4P61969 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lmo4P61969 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lmo4P61969 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lmo4P61969 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lmo4P61969 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lmo4P61969 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms