Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm9368-201ENSMUST00000219348 831 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 AC114573.1-201ENSMUST00000224120 1210 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.32□□□□□ -0.76
Sf3b6P59708 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Sf3b6P59708 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gm3961-201ENSMUST00000204425 994 ntBASIC10.32□□□□□ -0.76
Sf3b6P59708 Olfr284-202ENSMUST00000206647 966 ntBASIC10.32□□□□□ -0.76
Sf3b6P59708 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.32□□□□□ -0.76
Sf3b6P59708 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.32□□□□□ -0.76
Sf3b6P59708 AC159246.1-201ENSMUST00000214478 249 ntBASIC10.32□□□□□ -0.76
Sf3b6P59708 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.32□□□□□ -0.76
Sf3b6P59708 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sf3b6P59708 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.32□□□□□ -0.76
Sf3b6P59708 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sf3b6P59708 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b6P59708 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.31□□□□□ -0.76
Sf3b6P59708 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm15198-201ENSMUST00000117283 177 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm13786-201ENSMUST00000122371 333 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.31□□□□□ -0.76
Sf3b6P59708 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm44364-201ENSMUST00000198368 141 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.31□□□□□ -0.76
Sf3b6P59708 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms