Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.07□□□□□ -0.32
Rrp1P56183 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rrp1P56183 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.07□□□□□ -0.32
Rrp1P56183 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.07□□□□□ -0.32
Rrp1P56183 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Rrp1P56183 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rrp1P56183 Gm7584-201ENSMUST00000175829 940 ntBASIC13.07□□□□□ -0.32
Rrp1P56183 Gm38117-201ENSMUST00000194653 939 ntBASIC13.07□□□□□ -0.32
Rrp1P56183 Gm43758-201ENSMUST00000199500 367 ntBASIC13.07□□□□□ -0.32
Rrp1P56183 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.07□□□□□ -0.32
Rrp1P56183 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rrp1P56183 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rrp1P56183 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.07□□□□□ -0.32
Rrp1P56183 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rrp1P56183 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rrp1P56183 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Rrp1P56183 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rrp1P56183 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp1P56183 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Rrp1P56183 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm27046-201ENSMUST00000182160 463 ntBASIC13.06□□□□□ -0.32
Rrp1P56183 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm32999-201ENSMUST00000192693 562 ntBASIC13.06□□□□□ -0.32
Rrp1P56183 Rprl1-202ENSMUST00000198476 238 ntBASIC13.06□□□□□ -0.32
Rrp1P56183 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.06□□□□□ -0.32
Rrp1P56183 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.06□□□□□ -0.32
Rrp1P56183 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp1P56183 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rrp1P56183 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rrp1P56183 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rrp1P56183 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 Gm37580-201ENSMUST00000192408 2800 ntBASIC13.05□□□□□ -0.32
Rrp1P56183 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.05□□□□□ -0.32
Rrp1P56183 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.05□□□□□ -0.32
Rrp1P56183 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp1P56183 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rrp1P56183 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rrp1P56183 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms