Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.85□□□□□ -0.51
SftpbP50405 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SftpbP50405 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.84□□□□□ -0.51
SftpbP50405 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
SftpbP50405 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.84□□□□□ -0.51
SftpbP50405 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.84□□□□□ -0.51
SftpbP50405 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Mir8109-201ENSMUST00000184375 117 ntBASIC11.84□□□□□ -0.51
SftpbP50405 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.84□□□□□ -0.51
SftpbP50405 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.84□□□□□ -0.51
SftpbP50405 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.84□□□□□ -0.51
SftpbP50405 Gm44651-201ENSMUST00000207343 372 ntBASIC11.84□□□□□ -0.51
SftpbP50405 Gm45865-201ENSMUST00000211815 945 ntBASIC11.84□□□□□ -0.51
SftpbP50405 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.84□□□□□ -0.51
SftpbP50405 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SftpbP50405 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.84□□□□□ -0.51
SftpbP50405 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpbP50405 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.84□□□□□ -0.51
SftpbP50405 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
SftpbP50405 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SftpbP50405 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SftpbP50405 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SftpbP50405 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SftpbP50405 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
SftpbP50405 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Gm11439-201ENSMUST00000118598 409 ntBASIC11.83□□□□□ -0.52
SftpbP50405 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.83□□□□□ -0.52
SftpbP50405 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.83□□□□□ -0.52
SftpbP50405 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.83□□□□□ -0.52
SftpbP50405 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Gm45224-201ENSMUST00000208203 414 ntBASIC11.83□□□□□ -0.52
SftpbP50405 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.83□□□□□ -0.52
SftpbP50405 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.83□□□□□ -0.52
SftpbP50405 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SftpbP50405 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpbP50405 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SftpbP50405 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.83□□□□□ -0.52
SftpbP50405 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
SftpbP50405 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SftpbP50405 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms