Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Vcam1P29533 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Vcam1P29533 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.29□□□□□ -0.28
Vcam1P29533 Gm15197-201ENSMUST00000120526 478 ntBASIC13.29□□□□□ -0.28
Vcam1P29533 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.29□□□□□ -0.28
Vcam1P29533 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.29□□□□□ -0.28
Vcam1P29533 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.29□□□□□ -0.28
Vcam1P29533 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.29□□□□□ -0.28
Vcam1P29533 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.29□□□□□ -0.28
Vcam1P29533 Gm24248-201ENSMUST00000157321 322 ntBASIC13.29□□□□□ -0.28
Vcam1P29533 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.29□□□□□ -0.28
Vcam1P29533 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.29□□□□□ -0.28
Vcam1P29533 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.29□□□□□ -0.28
Vcam1P29533 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.29□□□□□ -0.28
Vcam1P29533 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vcam1P29533 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vcam1P29533 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.29□□□□□ -0.28
Vcam1P29533 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vcam1P29533 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Vcam1P29533 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcam1P29533 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.28□□□□□ -0.28
Vcam1P29533 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vcam1P29533 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 Gm25053-201ENSMUST00000103982 133 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 Gm25922-201ENSMUST00000104281 130 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 Gm13284-201ENSMUST00000121020 547 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcam1P29533 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Gm24679-201ENSMUST00000158762 111 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 Gm25053-202ENSMUST00000199731 132 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vcam1P29533 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vcam1P29533 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.28□□□□□ -0.28
Vcam1P29533 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vcam1P29533 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vcam1P29533 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.28□□□□□ -0.28
Vcam1P29533 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vcam1P29533 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Vcam1P29533 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.27□□□□□ -0.28
Vcam1P29533 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Vcam1P29533 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vcam1P29533 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Vcam1P29533 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.27□□□□□ -0.29
Vcam1P29533 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.27□□□□□ -0.29
Vcam1P29533 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.27□□□□□ -0.29
Vcam1P29533 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms