Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.74□□□□□ -0.37
Pde6bP23440 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.74□□□□□ -0.37
Pde6bP23440 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Mir1901-201ENSMUST00000122616 78 ntBASIC12.74□□□□□ -0.37
Pde6bP23440 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Gm24844-201ENSMUST00000158679 127 ntBASIC12.74□□□□□ -0.37
Pde6bP23440 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.74□□□□□ -0.37
Pde6bP23440 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pde6bP23440 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.74□□□□□ -0.37
Pde6bP23440 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pde6bP23440 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6bP23440 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.74□□□□□ -0.37
Pde6bP23440 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.73□□□□□ -0.37
Pde6bP23440 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pde6bP23440 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm22711-201ENSMUST00000116890 133 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm12407-201ENSMUST00000180219 324 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Mir6958-201ENSMUST00000184207 73 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Gm3551-201ENSMUST00000190750 664 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm2875-201ENSMUST00000211333 360 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pde6bP23440 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Pde6bP23440 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.73□□□□□ -0.37
Pde6bP23440 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pde6bP23440 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6bP23440 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pde6bP23440 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms