Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.59□□□□□ -0.71
Hmgn1P18608 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hmgn1P18608 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm8712-201ENSMUST00000221090 701 ntBASIC10.59□□□□□ -0.71
Hmgn1P18608 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm5455-201ENSMUST00000058710 715 ntBASIC10.59□□□□□ -0.71
Hmgn1P18608 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.59□□□□□ -0.71
Hmgn1P18608 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hmgn1P18608 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hmgn1P18608 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Hmgn1P18608 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.58□□□□□ -0.72
Hmgn1P18608 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm26956-201ENSMUST00000182176 986 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Mir8093-201ENSMUST00000185043 137 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm28937-201ENSMUST00000185413 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm5370-201ENSMUST00000187187 574 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm29400-201ENSMUST00000187208 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm28662-201ENSMUST00000188446 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm28251-201ENSMUST00000188835 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm37318-201ENSMUST00000194325 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm38017-201ENSMUST00000194768 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm37287-201ENSMUST00000195449 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm37793-201ENSMUST00000195548 695 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm6450-201ENSMUST00000200896 574 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hmgn1P18608 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.58□□□□□ -0.72
Hmgn1P18608 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hmgn1P18608 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms