Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm26286-201ENSMUST00000104166 134 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm12463-201ENSMUST00000118271 849 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm11793-201ENSMUST00000120433 981 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm6963-201ENSMUST00000147879 379 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm5070-201ENSMUST00000177599 862 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm3096-201ENSMUST00000185770 364 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.58□□□□□ -0.88
Cxcl1P12850 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm6450-201ENSMUST00000200896 574 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm19309-201ENSMUST00000218295 205 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.58□□□□□ -0.88
Cxcl1P12850 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl1P12850 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl1P12850 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Cxcl1P12850 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.57□□□□□ -0.88
Cxcl1P12850 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Gm5187-201ENSMUST00000117317 991 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Snora78-201ENSMUST00000158630 128 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.57□□□□□ -0.88
Cxcl1P12850 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Mir8093-201ENSMUST00000185043 137 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Gm5982-201ENSMUST00000196234 512 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Gm5705-201ENSMUST00000066241 711 ntBASIC9.57□□□□□ -0.88
Cxcl1P12850 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cxcl1P12850 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cxcl1P12850 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms