Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp6P0C0A3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Gm15515-201ENSMUST00000117827 822 ntBASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.65□□□□□ -0.38
Chmp6P0C0A3 AU022133-201ENSMUST00000200601 873 ntBASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Gm10288-201ENSMUST00000084614 537 ntBASIC12.65□□□□□ -0.38
Chmp6P0C0A3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp6P0C0A3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp6P0C0A3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp6P0C0A3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm14058-201ENSMUST00000116082 735 ntBASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm25732-201ENSMUST00000175168 60 ntBASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm27530-201ENSMUST00000184096 98 ntBASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp6P0C0A3 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.63□□□□□ -0.39
Chmp6P0C0A3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.63□□□□□ -0.39
Chmp6P0C0A3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Gm11450-201ENSMUST00000121144 333 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms