Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.19□□□□□ -0.78
P04224 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
P04224 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
P04224 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
P04224 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
P04224 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.19□□□□□ -0.78
P04224 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04224 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
P04224 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.18□□□□□ -0.78
P04224 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.18□□□□□ -0.78
P04224 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
P04224 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.18□□□□□ -0.78
P04224 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.18□□□□□ -0.78
P04224 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.18□□□□□ -0.78
P04224 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm12314-201ENSMUST00000118104 538 ntBASIC10.18□□□□□ -0.78
P04224 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.18□□□□□ -0.78
P04224 Gm12490-201ENSMUST00000120255 560 ntBASIC10.18□□□□□ -0.78
P04224 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.18□□□□□ -0.78
P04224 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
P04224 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm8738-201ENSMUST00000172606 329 ntBASIC10.18□□□□□ -0.78
P04224 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm27682-201ENSMUST00000183930 110 ntBASIC10.18□□□□□ -0.78
P04224 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.18□□□□□ -0.78
P04224 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.18□□□□□ -0.78
P04224 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.18□□□□□ -0.78
P04224 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.18□□□□□ -0.78
P04224 Gm5035-201ENSMUST00000215581 927 ntBASIC10.18□□□□□ -0.78
P04224 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm10076-201ENSMUST00000073238 384 ntBASIC10.18□□□□□ -0.78
P04224 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
P04224 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.18□□□□□ -0.78
P04224 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
P04224 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P04224 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P04224 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.18□□□□□ -0.78
P04224 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
P04224 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.18□□□□□ -0.78
P04224 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P04224 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04224 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P04224 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.17□□□□□ -0.78
P04224 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.17□□□□□ -0.78
P04224 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.17□□□□□ -0.78
P04224 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.17□□□□□ -0.78
P04224 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P04224 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04224 Gm11478-201ENSMUST00000117851 599 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms